Name
Concurrent Session: Demonstration of a Pipeline to Investigate the Genetic Relatedness Among Salmonella Isolates
Date & Time
Friday, September 6, 2024, 9:45 AM - 10:30 AM
Speakers
Description
• Introduction to NCBI pathogen detection system
• Development of a bioinformatics pipeline comparable to Pathogen Detection System
• Expand the pipeline to analyze the variable genome to obtain a more thorough representation of the isolate relatedness
• Demonstrate how to run the pipeline
• Use the pipeline to analyze Salmonella SNP clusters commonly associated with beef, chicken, pork, and turkey as well as historic Salmonella outbreaks
Location Name
Indiana A-E
Full Address
Indianapolis Marriott Downtown
IN
United States
IN
United States